Systems Genetics of Premorbid Risk and Cocaine Use Traits in a Rat Reduced Complexity Cross

Challenge Type: Overcoming Addiction

Overview

Dr. Chen and one TBD postdoc will analyze whole genome sequencing data of the SHR substrains, conduct de novo genome assembly, align data to the reference genome, call genetic variants based on de novo assembly or reference genome alignment, select markers for genotyping the F2 population, and analyze eQTL data. We will also present findings at scientific meetings and draft manuscripts

Project Category

Department/Sponsor

Boston University (BU)

Contact Information

Hao Chen

Find more Programs & Projects